Top 17 Gluten-Free Bakeries to Explore in Japan

Shochikuen Cafe

2-chōme-7-6 Nishiasakusa, Taito City, Tokyo 111-0035, Japan
Gluten Free Icon100% Dedicated Gluten-Free
PizzaVegan OptionsAllergen FriendlyBakeryCoffeeDairy Free OptionsKid FriendlyLunchTake AwayVegetarian OptionsBread ItemsBurgersDesserts100% GFBreakfastDinnerBrunchDeliveryPet Friendly
This tiny, cozy cafe is a delightful discovery for the gluten-free community, offering a 100% vegan and gluten-free menu that includes standout items like gluten-free pizza and a rainbow-colored cake. The intimate atmosphere and freshly prepared, delicious gluten-free treats make it a perfect spot for those seeking safe and tasty gluten-free options in a warm, welcoming setting.

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Lydia C.
Lydia C.
Fun little vegan and gluten-free cafe. The staff working were friendly and kind. It is a small place and the serves are to the smaller side, too. Maybe more of a snack and treat spot I’d say. We came for lunch and had a pizza and burger plus cake and smoothies and drinks and weren’t full after. The rainbow cake looks beautiful, but wasn’t too flavorful. Tiramisu was more enjoyable. Great alternative cafe if on the search for gluten-free and vegan or dairyfree sweat and savory treats!

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ONDEN House - Gluten-Free and Guilt-Free Cafè -

5-chōme-16-5 Jingūmae, Shibuya City, Tokyo 150-0001, Japan
Gluten Free Icon100% Dedicated Gluten-Free
100% GFSeparate GF MenuSeparate OvenKnowledgeable StaffDedicated GF Kitchen SpaceBakeryLunchBread ItemsPizzaDessertsBreakfastDinnerBrunchTake AwayPet FriendlyKid FriendlyDelivery
This bakery is a true haven for coeliac diners, offering a delightful array of expertly crafted gluten-free pizzas and baked goods that defy expectations. The medium-sized gluten-free pizzas boast a delicious taste and perfect chewy texture, making them stand out among typical gluten-free options. The small takeout space with outdoor benches provides a peaceful setting to savor these exceptional gluten-free treats, ensuring a safe and satisfying experience for those with gluten sensitivities.

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Vero .Ibril
Vero .Ibril
Excellent place for people with celiac disease! Everything is gluten-free and delicious. We tried the pepperoni pizza, a baguette, a bacon braid, and a kind of vegan curry-filled bun. It's a small takeout place, although there are a couple of benches outside where you can eat. The guy is very friendly and speaks perfect English. 100% recommended, but we recommend getting there early because they're so fast.

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Comeconoco Gluten-free Laboratory & Cafe 大阪天満橋店

Japan, 〒540-0034 Osaka, Chuo Ward, Shimamachi, 2-chōme−2−3 101
Gluten Free Icon100% Dedicated Gluten-Free
CoffeeBreakfastGF MenuAsian100% GF RestaurantDedicated GF Kitchen SpaceLunchSandwichesBakeryCasualBrunchTake AwayKnowledgeable StaffBread ItemsSeparate OvenSeparate GF MenuDessertsPasta100% GFDelivery
This cozy, minimalist cafe is a gluten-free haven where guests can savor freshly prepared rice flour bread and a variety of delicious gluten-free desserts like pumpkin cheesecake, chocolate torte, and carrot cake. The intimate setting allows diners to watch the careful preparation, creating a safe and inviting atmosphere for those with gluten sensitivities seeking flavorful, thoughtfully crafted meals and sweets.

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Marcus S
Marcus S
Amazing! Amazing! Lovely staff and a cosy little cafe. We arrived late in the day, 5.30 (close at 6pm) and they accommodated us for a quick dessert. They had sold out of their rice flour bread so couldn’t get the sandwiches. Highly recommend.

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Comme'N Gluten Free

7-chōme-19-12 Okusawa, Setagaya City, Tokyo 158-0083, Japan
Gluten Free Icon100% Dedicated Gluten-Free
SmoothiesBakeryLunchBread ItemsDessertsSandwiches100% GFDeliveryTake Away
This small, cozy bakery is a true haven for gluten-free enthusiasts, offering a completely gluten-free menu crafted from rice and starch flours. The moist, healthy, and very delicious breads and sandwiches, like the fluffy chiffon cake and shrimp avocado sandwich with huge shrimp, showcase how gluten-free can be indulgent. The casual, stylish atmosphere invites guests to enjoy allergy-labeled products in a welcoming setting, making it an ideal spot for those seeking safe and satisfying gluten-free options.

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藤生佳子
藤生佳子
I happened to come across a gluten-free bakery so I went there with my husband. Everything looked delicious and it was hard to choose. The staff were friendly and very likable. When I received the bread, some were warm and I couldn't resist, so I tried them on a bench in a nearby square. They were plump and had the aroma of rice flour and were delicious. I'm going to buy some more now. I hope they still have some left.

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biossa

2-chōme-10-19 Kasuga, Bunkyo City, Tokyo 112-0003, Japan
Gluten Free Icon100% Dedicated Gluten-Free
BakeryBreakfastBrunchKid FriendlyLunchTake AwayVegan OptionsVegetarian Options100% GF RestaurantGF MenuDedicated GF Kitchen SpaceKnowledgeable StaffBread ItemsSeparate OvenSeparate GF MenuDesserts100% GFDelivery
This bakery offers a unique gluten-free experience with its luminous shelves showcasing a carefully curated selection of breads made exclusively from rice and almond flour. Despite its compact size, the shop impresses with moist, flavorful gluten-free breads that redefine expectations, including standout salted butter rolls with a crispy surface and juicy butter flavor, and chocolate bread that tastes like cake with chocolate chips kneaded inside. The breads feature a chewy texture and crispy exterior after warming or toasting, providing a satisfying and light alternative to traditional wheat breads. Certified gluten-free and crafted to delight those with wheat allergies or gluten sensitivities, this bakery is a must-visit for anyone seeking delicious, authentic gluten-free bread that doesn't compromise on taste or texture.

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__
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Saved our trip! My son is gluten free, and Japan (largely) is not. It was very hard to find food for him, and other gluten free shops either weren’t really gluten free, or just tasted bad, had very small menus, or were closed when they said they were open. But Biossa had exactly what we needed. Good, fresh, delicious gluten free bread, muffins, baguettes, and croissants! That way we could pack and carry the breads around Tokyo, so my son could eat almost anywhere (by swapping out the provided breads with these gluten free ones). Game-changing. Thanks Biossa!

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Cafe Komaya - gluten free cafe

Japan, 〒106-0032 Tokyo, Minato City, Roppongi, 3-chōme−4−16 IDAKIビル
Gluten Free Icon100% Dedicated Gluten-Free
Allergen FriendlyBrunchCoffeeLunchTake AwayVegetarian OptionsVegan Options100% GFSeparate GF MenuKnowledgeable StaffDedicated GF Kitchen SpaceBread ItemsDessertsSandwichesBreakfastDelivery
This entirely gluten-free cafe offers a cozy, homely atmosphere perfect for those with gluten sensitivities seeking a safe and relaxing dining experience. The carefully crafted gluten-free menu features standout delights like the delicate Souffle Maria chocolate cake and the excellent gluten-free pizza plate, all served in a quiet and peaceful setting. Knowledgeable staff ensure cross-contamination concerns are addressed, making it a trusted haven for Celiacs and gluten-free diners alike.

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Emily Hunt
Emily Hunt
Had lunch here today, phenomenal curry. Our waitress informed us the cafe is closing for 2 months and will only serve coffee and gluten free cake going forward. No more meals.

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Gluten Free Cafe Tamakuchen

Japan, 〒158-0094 Tokyo, Setagaya City, Tamagawa, 3-chōme−20−1 名川ビル 名川ビル1F
Gluten Free Icon100% Dedicated Gluten-Free
Allergen FriendlyDairy Free OptionsDinnerKid FriendlyOpen Late NightLunchVegetarian OptionsVegan Options100% GFSeparate GF MenuSeparate OvenKnowledgeable StaffDedicated GF Kitchen SpaceBread ItemsBeerCafeDeliveryTake Away
This cafe is a haven for those seeking gluten-free delights with its natural, additive-free rice flour breads like the chewy amakasu and Nico loaves that defy the typical dryness of gluten-free fare. The rich Earl Grey cheesecake and Baumkuchen add a sweet, satisfying touch, all enjoyed within a cozy, British-inspired interior that feels both chic and inviting. Its carefully crafted gluten-free menu makes it a standout spot for anyone with gluten sensitivities who still craves delicious bread and sweets.

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Harsha P
Harsha P
loved the gluten free bread and hot choclate

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Love for All

Japan, 〒920-0961 Ishikawa, Kanazawa, Kōrinbō, 2-chōme−4−26 K2ビル
Gluten Free IconCeliac friendly
SeafoodBurgersVegan OptionsAllergen FriendlyDairy Free OptionsDinnerLunchTake AwayVegetarian OptionsBeerBread ItemsCiderDessertsPizzaSandwichesSushiDeliveryPet FriendlyCafe
This intimate spot is a celiac's paradise, offering a warm, elegant ambiance that complements its dedicated gluten-free menu. Guests can savor standout dishes like the tofu-based pizza and gluten-free ramen, all crafted with organic, vegan ingredients. The thoughtful, family-run atmosphere and selection of locally brewed gluten-free beers make it a top choice for those seeking safe and delicious gluten-free dining experiences in Kanazawa.

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Camilla Ragazzi
Camilla Ragazzi
It is definitely not street food and the prices may be slightly higher than average. However, everything was delicious, the portions were just right in quantity according to Japanese standards and above all everything was vegan and gluten-free. I would definitely go back

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MOCMO sandwiches (Gluten free sandwiches)

Japan, 〒181-0013 Tokyo, Mitaka, Shimorenjaku, 1-chōme−17−4 2F
Gluten Free IconCeliac friendly
LunchCafeSandwichesDeliveryTake AwayPet FriendlyOutdoor SeatingBread Items
This spot is a must for those eating gluten-free, offering a unique crepe-like bread that wraps flavorful fillings without wheat. The gluten-free sandwiches are delicious and tightly packed, providing a satisfying meal for celiac diners and those with wheat allergies. The healthy-oriented menu features fresh ingredients like strawberry and egg, all served in a cozy wood-grained interior or on a dog-friendly terrace, making it an inviting place to enjoy safe, flavorful gluten-free options near the park.

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Miranda  Rose
Miranda Rose
Yumm, so good!! Had a gluten free strawberry/cream and a curry egg sandwich! It was delicious!

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Cafe Komaya

2-chōme-4-22 Ichibanchō, Aoba Ward, Sendai, Miyagi 980-0811, Japan
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BrunchCoffeeLunchSeafoodBread ItemsDessertsDeliveryTake Away100% GFDinner
Entirely gluten-free menu ensures a safe and delightful experience for those with gluten sensitivities, featuring moist rice flour bread and carefully crafted dishes like cream-coated chicken. The elegant cafe's art museum-like atmosphere with elaborate decorations and a slightly spiritual vibe creates a cozy yet energizing setting, perfect for enjoying gluten-free meals and sweets alongside healthy wild species coffee.

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城坂テロリズム
城坂テロリズム
It is located in a building directly connected to a subway station. This time I had a gluten-free sandwich. The sandwich, which mainly consisted of lightly seasoned vegetables, ham, and shimeji mushrooms, was delicious. It may be suitable for those who prefer a lighter seasoning. There were also handmade items for sale and a take-out menu. The clientele is classy and calm, so you can relax. The decorations and vessels are so elaborate that it looks like a museum. Recommended for those who like this kind of atmosphere!

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M's Table

Japan, 〒231-0861 Kanagawa, Yokohama, Naka Ward, Motomachi, 4-chōme−171 ポンパドウル元町本店ビル 2階
Gluten Free IconAccommodating Gluten-Free
Vegan OptionsAsianBrunchDairy Free OptionsDinnerKid FriendlyLunchTake AwayVegetarian OptionsBread ItemsBurgersDessertsPancakesPastaPizzaSandwichesSushiCafeDelivery
This bright, spacious restaurant offers a carefully curated organic gluten-free menu, featuring standout dishes like gluten-free pasta and a delicious vegetables pizza. The clean, white interior with a calming atmosphere complements the thoughtful, gluten-free-friendly vegan options, making it an ideal spot for those seeking both health-conscious and flavorful meals. The clearly labeled gluten-free dishes and attentive service ensure a comfortable, worry-free dining experience for guests with gluten sensitivities.

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hoi
hoi
A restaurant where you can eat delicious vegan food. I came here with my child who doesn't like meat. I ordered a lunch course, but the number of appetizers was Children can taste many different kinds. I was very happy! It’s hard to believe that the pasta noodles are gluten-free. It was delicious, so I visited the manufacturer and was shown the product, and it turned out to be organic gluten-free pasta. I don't think it was written as organic on the menu, so it may change again, but I felt that they were particular about it, even though it was probably quite expensive compared to similar products. It's vegan, gluten-free, healthy, and reasonably priced, so it's become my favorite restaurant. The staff at the hall were very attentive. This is a recommended point! I will visit you again, thank you very much.

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FALAFEL BROTHERS ROPPONGI

Japan, 〒106-0032 Tokyo, Minato City, Roppongi, 5-chōme−1−11 三共無線六本木ビル
Gluten Free IconAccommodating Gluten-Free
Vegan OptionsDairy Free OptionsDinnerVegetarian OptionsFriesLunchBrunchDeliveryTake AwayPet FriendlyOutdoor SeatingBread ItemsBreakfast
This cozy spot offers a global vibe with a tiny counter that buzzes with international guests, creating a travel-like atmosphere perfect for those seeking gluten-free dining. Their falafel, made fresh upon ordering, is a standout with gluten-free options that cater well to diverse diets. Complemented by a choice of fresh salads and naturally gluten-free hummus with extra toppings, the experience is both flavorful and mindful of dietary needs. The intimate setting and freshly prepared vegan fare make it a delightful destination for gluten-sensitive diners looking for vibrant, wholesome meals.

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Alyssa Cameron
Alyssa Cameron
DO NOT EAT HERE IF YOU ARE COELIAC!!! I ordered from here the other night (it was actually great food and super well priced) and then went to order again today and reiterated that I’m coeliac and it’s an allergy and the person said that even though it says ‘gluten-free’ it’s ALL IN THE SAME FRYER!!!! I was really disappointed because the person serving me the other night hadn’t told me this and I had a reaction and couldn’t figure out where I’d eaten gluten. Please educate your staff when someone is ordering gluten-free there is a high chance it is an ALLERGY and not by choice.

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Una Camera Livera

101 2-chōme-12-5 Nakano, Nakano City, Tokyo 164-0001, Japan
Gluten-free options
Allergen FriendlyBakeryBreakfastBrunchCoffeeDairy Free OptionsLunchOutdoor SeatingTake AwayVegan OptionsVegetarian OptionsBread ItemsDessertsSandwichesDinnerDeliveryPet FriendlyKid Friendly
This cafe offers a warm, nostalgic interior that feels like a secret hideout, perfect for those seeking a gluten-free haven. Its menu features crispy yet chewy rice flour baguettes and moist, vegan rice flour tatin cake, crafted without wheat, dairy, or sugar. The home-like atmosphere, where guests remove shoes and children enjoy toys, complements the delightful gluten-free offerings that stand out for their texture and flavor.

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Kyoko
Kyoko
Review for こめパンカフェ (Monday & Tuesday) A really good gluten-free cafe serving rice flour baguette sandwiches. My chicken sandwich was delicious, and I really enjoyed the Satsuma potato pottage. The baguette was one of the best gluten-free baguettes I’ve ever had. It was crunchy on the outside, and soft and chewy on the inside. Next time I will try to come earlier in the day so I can buy cinnamon rolls. The staff were very friendly and welcoming. They also understood wheat and gluten sensitivities very well.

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Bakery & Table Hakone

9-1 Motohakone, Hakone, Ashigarashimo District, Kanagawa 250-0522, Japan
Gluten-free options
BakeryCafeDeliveryTake AwayBread Items
While this bakery offers a beautiful atmosphere and panoramic lake views that create a relaxing setting, it currently lacks gluten-free options, which limits its appeal for those seeking gluten-free choices. The focus remains on wheat-based breads, celebrated for their taste, but the menu has yet to evolve to meet changing dietary preferences.

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Ma Mas
Ma Mas
Beautiful panorama. No gluten free. Costs too much. And there is no table service.

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Koishiya Ryokan

2277 Hirao, Yamanochi, Shimotakai District, Nagano 381-0401, Japan
Gluten-free options
CafeBread ItemsBarRestaurant
This cozy ryokan stands out for its accommodating approach to gluten and nut allergies, ensuring a safe and enjoyable dining experience. The kitchen happily modifies dishes to suit dietary needs, offering delights like a flavorful mushroom sampler that caters to gluten-free guests. Beyond the thoughtful cuisine, the traditional Japanese-style rooms with spacious tatami mats and access to nine unique onsens create a relaxing ambiance that complements the mindful dining experience.

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Paul Schweitzer
Paul Schweitzer
This restaurant was a great first stop in Shibu Onsen! They were incredibly accommodating of gluten and nut allergies and were happy to modify anything they could. The mushroom sampler was great, but we recommend skipping the snow monkey branded sake (better options available).

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メキシコレストラン トルタコス

73 Renpeichō, Chuo Ward, Kumamoto, 860-0017, Japan
Gluten-free options
DinnerMexicanCocktailsTacosDeliveryTake AwayBread Items
For those seeking gluten-free Mexican cuisine, this vibrant spot offers a welcoming experience with dishes like Tacos Maza and Aztec soup that are safe and delicious for coeliac diners. The stylish, pop-inspired interior complements the authentic flavors, creating a cozy yet unique atmosphere perfect for enjoying carefully prepared gluten-free options.

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Charlie Beeson
Charlie Beeson
Fantastic authentic mexican food. I am allergic to gluten (coeliac) and we spoke to the chef who advised I can eat all of the Tacos Maza and Soups. Aztec soup in particular was really special. Delicious, thank you! They have vegetarian and vegan menus too

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My Bánh Mì by Gluten Free TOKYO

Japan, 〒150-0001 Tokyo, Shibuya City, Jingūmae, 1-chōme−20−4 Axia原宿 307
Gluten Free Icon100% Dedicated Gluten-Free
Vegan OptionsGF Menu100% GF RestaurantDedicated GF Kitchen SpaceBakeryBreakfastBrunchCoffeeDairy Free OptionsKid FriendlyLunchOutdoor SeatingTake AwayVegetarian OptionsKnowledgeable StaffBread ItemsSeparate OvenSeparate GF MenuBeerDessertsSandwichesWaffles / Crepes100% GF

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Carly Brender
Carly Brender
Gluten free sandwiches in a very cute cafe in Harajuku! Safe and yummy.

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