Atly Logo

The 9 Best Gluten-Free Grocery Stores in Indianapolis

Gluten Free UsersGluten Free UsersGluten Free Users
36+

By Gluten Free Eats' gluten-free community

Updated Apr 2025

01
Trader Joe's

Trader Joe's

Gluten Free Icon

Accommodating

2902 W 86th St, Indianapolis, IN 46268, USA

DeliveryGrocery Store
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more
Profile Image
Caitlin Young

They have great dairy free cheese and best sprouted bread. They gave me flowers when I found out I had a positive pregnancy test for my first baby. The Gluten free cinnamon muffins are amazing!

Gluten Free Menu Icon
GF options marked
02
Trader Joe's

Trader Joe's

Gluten Free Icon

Accommodating

5473 E 82nd St, Indianapolis, IN 46250, USA

DeliveryGrocery Store
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more
Profile Image
Martha “Who U” Wilson

great gluten free muffins

Gluten Free Menu Icon
GF options marked
03
Fresh Thyme Market

Fresh Thyme Market

Gluten Free Icon

Gluten-free options

2342 W 86th St, Indianapolis, IN 46260, USA

BakeryDeliveryGrocery Store
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more
Profile Image
Heather Gillbanks

Love this place. Almost the same selection as WF for healthy items. Better selection of supplements. And usually a little cheaper than WF. I appreciate their commitment to stocking gluten free items as a regular thing.

Gluten Free Menu Icon
GF options marked
04
Whole Foods Market

Whole Foods Market

Gluten Free Icon

Gluten-free options

320 E Market St, Indianapolis, IN 46204, USA

DeliveryGrocery Store
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more
Profile Image
Misty Greene

If your able body and do mot need a mobility cart, it's beautiful, clean and organized... if you need a cart they no longer have a working one, she said " sorry, no, somebody peed on it" ... then if you need gluten free selection. Have fun looking all over for stuff that they no longer carry or keep in a gluten free section. My hubby had his personal cart so was able to go look.. he asked the bakery if they have GF options. Was told "we no longer have any gluten-free options in the bakery due to the corporate take over" So I'm sure it's good for other people. Just not Us.

Gluten Free Menu Icon
GF options marked
05
The Fresh Market

The Fresh Market

Gluten Free Icon

Gluten-free options

5415 N College Ave, Indianapolis, IN 46220, USA

BakeryDeliveryGrocery Store
Gluten Free Users
Gluten Free Users
Learn more
Profile Image
Melissa Vanilla

Great store! Tons of beautiful well kept produce. Clean. Lots of Gluten Free foods!!! Friendly staff too!

Gluten Free Menu Icon
GF options marked