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The 50 Best Gluten-Free Breakfast Spots in Japan

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By Gluten Free Eats' gluten-free community

Updated May 2025

01
Shochikuen Cafe

Shochikuen Cafe

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100% Dedicated Gluten-Free

2-chōme-7-6 Nishiasakusa, Taito City, Tokyo 111-0035, Japan

PizzaVegan OptionsGF OptionsAllergen FriendlyBakeryCoffeeDairy Free OptionsKid FriendlyLunchTake AwayVegetarian OptionsBread ItemsBurgersDesserts100% GFCeliac FriendlyBreakfastDinnerBrunchDeliveryPet Friendly
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Tyler Knip

Nice they have a vegan/gluten free option. Pricey.

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Dedicated gluten-free menu
02
waco crepes

waco crepes

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100% Dedicated Gluten-Free

6-chōme-355-1 Miyagawasuji, Higashiyama Ward, Kyoto, 605-0801, Japan

Dedicated GF MenuVegan Friendly100% Gluten FreeVegetarian OptionsWaffles / CrepesBeerDessertsLunchCafeBrunchAllergen FriendlyDairy FreeOutdoor SeatingTake AwayKid FriendlyCeliac Friendly100% GFDedicated GF FryerBreakfastDeliveryRestaurant
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Mel Griffin

Amazing. We ordered two savory and two sweet crepes and their matcha lattes. Everything was delicious and the staff is so friendly. The place is small so go early for seats.

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03
ONDEN House - Gluten-Free and Guilt-Free Cafè -

ONDEN House - Gluten-Free and Guilt-Free Cafè -

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100% Dedicated Gluten-Free

5-chōme-16-5 Jingūmae, Shibuya City, Tokyo 150-0001, Japan

GF Options100% GFCeliac FriendlySeparate GF MenuSeparate OvenKnowledgeable StaffDedicated GF Kitchen SpaceBakeryLunchBread ItemsPizzaDessertsBreakfastDinnerBrunchTake AwayPet FriendlyKid FriendlyDelivery
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It's been a while since I ate pizza, I can't believe it's gluten free It was delicious!

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04
CHOICE

CHOICE

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100% Dedicated Gluten-Free

Japan, 〒605-0009 Kyoto, Higashiyama Ward, Ōhashichō, ８９−１ 鈴木形成外科ビル 1F

Celiac FriendlyVegan OptionsGF OptionsTake AwayDeliveryCasualAllergen FriendlyBreakfastBrunchCoffeeDairy Free OptionsLunchVegetarian OptionsKnowledgeable StaffBurgersDessertsPancakesPizza100% GFPastaDinner
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Carlotta Stendardo

We had lunch here twice given the wide availability of gluten-free dishes. The service was truly impeccable. Excellent pizza. For me the best dish ever

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05
MOON and BACK Ramen Bar & Brunch Cafe

MOON and BACK Ramen Bar & Brunch Cafe

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Celiac friendly

585 Takamiyachō, Nakagyo Ward, Kyoto, 604-8056, Japan

BreakfastLunchDinnerBrunchVeganOpen LateCafeAsianDeliveryTake AwayKid FriendlyVegetarianCeliac Friendly
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Amazing spot for dietaries. They have 2 vegan Ramen and offer gluten-free noodles and dishes. The vegan gluten-free dumplings we tried were delicious and their signature Ramen, too. They also serve gluten-free beer. Totally recommended, we will be back.

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