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The 50 Best Gluten-Free Bakeries in South Dakota

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By Gluten Free Eats' gluten-free community

Updated Apr 2025

01
CNC Food Factory

CNC Food Factory

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Celiac friendly

3400 S Southeastern Ave, Sioux Falls, SD 57103, USA

GF OptionsAllergen FriendlyBakeryBreakfastBrunchCoffeeKid FriendlyLunchTake AwayVegetarian OptionsVegan OptionsDedicated GF Kitchen SpacePizzaDeliveryCeliac Friendly100% GF
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Sarah Hanson

The food is always fresh and so tasty! The owners are the best. They are a delight every visit and so welcoming. For any gluten-free friends, my family is celiac and they haven't had issues with their donuts or breakfast pizzas (our favorites)!

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02
Nanna's Café & Bread Company

Nanna's Café & Bread Company

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Celiac friendly

523 Main St, Rapid City, SD 57701, USA

BreakfastLunchBrunchBakeryDeliveryTake AwayKid FriendlyCafe100% GFCeliac Friendly
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Libbertie Richmond

This is my new weekend spot! As a celiac individual there is no way to describe being able to eat stress free without asking a million questions and most likely still getting sick. If you know you know. I am beyond grateful for a place like this! Thank you so much for creating a space for us!

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03
Alternative Fuel Coffee House

Alternative Fuel Coffee House

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Accommodating

512 Main St Suite 110, Rapid City, SD 57701, USA

GF OptionsAllergen FriendlyBreakfastBrunchCoffeeDairy Free OptionsKid FriendlyLunchOutdoor SeatingTake AwayVegan OptionsVegetarian OptionsBread ItemsDessertsSandwichesAmericanBakeryPet Friendly
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Greg Post

Highly recommend if you are in the area. Made a special trip to route back through Rapid City to be able to stop and get more gluten free items and coffee. Atmosphere was great as well.

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04
CH Patisserie

CH Patisserie

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Accommodating

309 S Phillips Ave, Sioux Falls, SD 57104, USA

GF OptionsAllergen FriendlyBakeryBreakfastBrunchKid FriendlyTake AwayDesserts
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Sarah Chernatinski

I can always find something gluten free here and when all I'm in the mood for a sweet treat, the macarons are the best! My out of state family always hopes I will bring them some when I come visit. Today I went in for the Chicken Bacon Ranch Quiche and husband got the Brioche Au Caramel. We were both very happy with our choices and as always, we intend to go back!

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05
Oh My Cupcakes!

Oh My Cupcakes!

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Celiac friendly

5015 S Western Ave Unit 290, Sioux Falls, SD 57108, USA

Vegan OptionsGF OptionsBakeryDeliveryKid FriendlyOutdoor SeatingVegetarian OptionsDessertsCeliac FriendlyTake Away
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Nick Sampson

Cupcakes are great from what others that got cupcakes. Their safety for gluten free was bad. She literally grabbed a regular cupcake then with the same gloved hand reach over and grabbed the gluten free cupcake. Then proceeded to try to put them together in the same container. Then when moving kept grabbing one then the other. Watching her touch the actual cupcake part not just the wrapper. After I said I didn't want it any more cause it wasn't safe, SHE PUT IT BACK in the gluten free case! So now someone else will get it and get sick! I was looking very forward for weeks to trying this place while in town. What a disappointment. Edit: After a conversation with a representative. I will be returning to give this business a second chance. It sounds like there are procedures in place that just didn't get followed this time, and from my understanding has been corrected.

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